Publications

2025

A stem cell-based platform for functional analysis of genetic variants in lung disease
Wallman DJ, Homma ST, Finton M, Beermann ML, Jacob A, Choksi SP, Pletcher SD, Xu H, Singh Bawa P, Reiter JF, Horani A, Brody SL, Berical A, Hawkins FJ.
bioRxiv. 2025 Jul 25
doi: 2025.07.28.667211

Multicilia dynamically transduce Sonic Hedgehog signaling to regulate choroid plexus functions
Mao S, Song R, Jin S, Jovanovic A, Zimmerman A, Li P, Wu X, Wendland MF, Lin K, Chen WC, Choksi SP, Chen G, Holtzman MJ, Reiter JF, Wan Y, Xuan Z, Xiang YK, Xu CS, Upadhyayla S, Hess HF, He L.
Cell Reports. 2025 Mar 25
PMID: 40057957

2024

An alternative cell cycle coordinates multiciliated cell differentiation
Choksi SP, Byrnes LE, Konjikusic MJ, Tsai BWH, Deleon R, Lu Q, Westlake CJ, Reiter JF.
Nature. 2024 Jun
PMCID: 11996048

2023

An RFX transcription factor regulates ciliogenesis in the closest living relatives of animals
Coyle MC, Tajima AM, Leon F, Choksi SP, Yang A, Espinoza S, Hughes TR, Reiter JF, Booth DS, King N.
Current Biology. 2023 Sep 11
PMID: 37552984

2021

Vertebrate cells differentially interpret ciliary and extraciliary cAMP
Truong ME, Bilekova S, Choksi SP, Li W, Bugaj LJ, Xu K, Reiter JF.
Cell. 2021 May 27
PMID: 33932338

Flow-Cytometric Analysis and Purification of Airway Epithelial-Cell Subsets
Bonser LR, Koh KD, Johansson K, Choksi SP, Cheng D, Liu L, Sun DI, Zlock LT, Eckalbar WL, Finkbeiner WE, Erle DJ.
Am J Respir Cell Mol Biol. 2021 Mar
PMID: 33196316

2017

Evolutionary Proteomics Uncovers Ancient Associations of Cilia with Signaling Pathways
Sigg MA, Menchen T, Lee C, Johnson J, Jungnickel MK, Choksi SP, Garcia G 3rd, Busengdal H, Dougherty GW, Pennekamp P, Werner C, Rentzsch F, Florman HM, Krogan N, Wallingford JB, Omran H, Reiter JF.
Developmental Cell. 2017 Dec 18
PMID: 29257953

2015

A function for the Joubert syndrome protein Arl13b in ciliary membrane extension and ciliary length regulation
Lu H, Toh MT, Narasimhan V, Thamilselvam SK, Choksi SP, Roy S.
Developmental Biology. 2015 Jan 15
PMID: 25448689

2014

Systematic discovery of novel ciliary genes through functional genomics in the zebrafish
Choksi SP, Babu D, Lau D, Yu X, Roy S.
Development. 2014 Sep
PMID: 25139857

Switching on cilia: transcriptional networks regulating ciliogenesis
Choksi SP, Lauter G, Swoboda P, Roy S.
Development. 2014 Apr
PMID: 24644260 Review.

2008

Specification of vertebrate slow-twitch muscle fiber fate by the transcriptional regulator Blimp1
Liew HP, Choksi SP, Wong KN, Roy S.
Developmetal Biology. 2008 Dec 15
PMID: 18948093

2006

Prospero acts as a binary switch between self-renewal and differentiation in Drosophila neural stem cells
Choksi SP, Southall TD, Bossing T, Edoff K, de Wit E, Fischer BE, van Steensel B, Micklem G, Brand AH.
Developmental Cell. 2006 Dec
PMID: 17141154